Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015897791.1_cds_XP_016448261.1_42933
CDS Infomation

[gene=LOC107773351] [db_xref=GeneID:107773351] [protein=polygalacturonase-like] [protein_id=XP_016448261.1] [location=complement(join(31809..32027,32203..32431,33066..33355,35884..36318))] [gbkey=CDS]
Sequence

ATGAATACCAGAAAATTTATTCTTCTTCTTCTAACCATCTTCTTTCATTCATCATCAGGA
ACCAAGACTACCTACAATGTGCAAAGTTATGGAGCCAAACCTGATGGCAAGACTGATTCA
GCAAAAGCATTTCTGAGTGCATGGGCTGCAGCTTGTGCTTCTACAAAGTCTGTTGTGATA
TACGTGCCACAAGGAAGGTATTTAATAGGAAGTGCTGCATTTTGGGGACAATATTGCAAG
AACAAAGCTACTACAATCAGGATTGATGGCACCTTAGTGGCACCCTCTGATTATAAAGTT
ATAGGTAATACTGGAAATTGGCTAAAGTTTGAGAGAGTCAACGGAGTCACCATTTCTGGT
GGGACTTTTGATGGTCAAGGTGCTTCTCTTTGGGCTTGTAAAGCCTCTGGCAAGAGTTGT
CCTGCCGGAGCAACGACACTTGCCTTTTACAATTCAAACAACATTGTGATGAGTGGATTG
ACTTCATTAAACAGCCAGATGTTCCATGTGGTACTTGATGGGTGCCAAAATGCTAAGCTG
CAGAAGATGAAAATCTCAGCCTCAGCTAGCAGCCCAAACACCGATGGGATTCACATAGAA
GCTTCTTCTGGTGTCACCATTCTGAAAACTGTAATTGGTACTGGAGATGACTGTGTTTCA
ATAGGCCCTGGCACCTCCAACTTGTGGATTGAAAATGTTTCCTGTGGCCCTGGCCACGGC
ATAAGCATTGGAAGTCTAGGCTGGGGTATGCAAGAACCAGGAGTTCAAAATGTCACAGTG
AAGACCACTACATTTAGAGGTACACAAAATGGTCTGAGAATAAAGACATGGGCAAGGCCT
AGCAATGGATTTGTAAAAGGTGTTCTCTTTCAGCATTCTGTGATGGTGAATGCCAGATAC
CCCATCTTAATTGACCAAGAATATTGCCCTGATCAGAAGAATTGCCTTGACCAGGAATCA
GGAGTTAAGATAAGCGATGTAACATATCAAGACGTTCATGGAACATCAACATCACAAGTC
GCAGTAAAACTTGCTTGTAGTAAGGCTAATCCCTGCAAAGGGATTAGACTGGAGGATGTA
AATCTTACCTTTAAAAATCAACAACCACAAGCGTTATGCTCCAATGCTGCTGGAACTTCC
TATGGTCTAAATAAACCAGCAAGCTGTTTGTAG

Peptide Sequence

PEP ID

XP_016448261.1
PEP Infomation

PREDICTED: polygalacturonase-like [Nicotiana tabacum]
Sequence

MNTRKFILLLLTIFFHSSSGTKTTYNVQSYGAKPDGKTDSAKAFLSAWAAACASTKSVVI
YVPQGRYLIGSAAFWGQYCKNKATTIRIDGTLVAPSDYKVIGNTGNWLKFERVNGVTISG
GTFDGQGASLWACKASGKSCPAGATTLAFYNSNNIVMSGLTSLNSQMFHVVLDGCQNAKL
QKMKISASASSPNTDGIHIEASSGVTILKTVIGTGDDCVSIGPGTSNLWIENVSCGPGHG
ISIGSLGWGMQEPGVQNVTVKTTTFRGTQNGLRIKTWARPSNGFVKGVLFQHSVMVNARY
PILIDQEYCPDQKNCLDQESGVKISDVTYQDVHGTSTSQVAVKLACSKANPCKGIRLEDV
NLTFKNQQPQALCSNAAGTSYGLNKPASCL

Transcript Sequence

Gene sequence data has not been registered.